ENSMUSG00000042428


Mus musculus

Features
Gene ID: ENSMUSG00000042428
  
Biological name :Mgat3
  
Synonyms : mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase / Mgat3
  
Possible biological names infered from orthology : Q09327
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: E1
Gene start: 80173721
Gene end: 80215519
  
Corresponding Affymetrix probe sets: 10425354 (MoGene1.0st)   1422145_at (Mouse Genome 430 2.0 Array)   1428801_at (Mouse Genome 430 2.0 Array)   1428802_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043077
NCBI entrez gene - 17309     See in Manteia.
MGI - MGI:104532
RefSeq - XM_011245485
RefSeq - NM_010795
RefSeq - XM_006520556
RefSeq - XM_006520557
RefSeq - XM_006520553
RefSeq - XM_006520554
RefSeq - XM_006520555
RefSeq Peptide - NP_034925
swissprot - Q5RKT9
Ensembl - ENSMUSG00000042428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mgat3aENSDARG00000038069Danio rerio
 mgat3bENSDARG00000036619Danio rerio
 MGAT3ENSGALG00000036743Gallus gallus
 MGAT3ENSG00000128268Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006813  Glycosyl transferase, family 17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006487 protein N-linked glycosylation IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Reactions specific to the hybrid N-glycan synthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Apaf1Gt(IRESBetageo)XIX18Pgr/Apaf1Gt(IRESBetageo)XIX18Pgr
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * NMRI

 MP:0003402 decreased liver weight "reduced average weight of the bile-secreting exocrine gland" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Jchaintm1Jse/Jchaintm1Jse
Genetic Background: involves: 129X1/SvJ

 MP:0004001 decreased hepatocyte proliferation "reduced growth and reproduction of hepatocyte cells of the liver" [anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator]
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Allelic Composition: Jchaintm1Jse/Jchaintm1Jse
Genetic Background: involves: 129X1/SvJ

 MP:0004502 decreased incidence of chemically-induced tumors "lower than normal frequency of tumor incidence induced by one or more chemical carcinogens or mutagens" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Jchaintm1Jse/Jchaintm1Jse
Genetic Background: involves: 129X1/SvJ

 MP:0005517 decreased liver regeneration "less than the normal ability of liver to regenerate healthy tissue following partial hepatectomy" [RGD:Rat Genome Database submission, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Jchaintm1Jse/Jchaintm1Jse
Genetic Background: involves: 129X1/SvJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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