ENSMUSG00000042581


Mus musculus

Features
Gene ID: ENSMUSG00000042581
  
Biological name :Thsd7b
  
Synonyms : Q6P4U0 / thrombospondin, type I, domain containing 7B / Thsd7b
  
Possible biological names infered from orthology : Q9C0I4 / thrombospondin type 1 domain containing 7B
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: E4
Gene start: 129273302
Gene end: 130219278
  
Corresponding Affymetrix probe sets: 10349529 (MoGene1.0st)   1445115_at (Mouse Genome 430 2.0 Array)   1446478_at (Mouse Genome 430 2.0 Array)   1460627_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041716
Ensembl peptide - ENSMUSP00000073220
Ensembl peptide - ENSMUSP00000117750
NCBI entrez gene - 210417     See in Manteia.
MGI - MGI:2443925
RefSeq - XM_011247966
RefSeq - NM_172485
RefSeq - XM_011247964
RefSeq - XM_011247965
RefSeq Peptide - NP_766073
swissprot - Q8BHP3
swissprot - D3Z366
swissprot - Q6P4U0
Ensembl - ENSMUSG00000042581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thsd7baENSDARG00000095022Danio rerio
 thsd7bbENSDARG00000061497Danio rerio
 THSD7BENSGALG00000012362Gallus gallus
 Q9C0I4ENSG00000144229Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Thsd7a / thrombospondin type 1 domain containing 7A / Q9UPZ6*ENSMUSG0000003262549


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr