ENSMUSG00000042660


Mus musculus

Features
Gene ID: ENSMUSG00000042660
  
Biological name :Wdr55
  
Synonyms : Q9CX97 / Wdr55 / WD repeat domain 55
  
Possible biological names infered from orthology : Q9H6Y2
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B2
Gene start: 36760239
Gene end: 36763708
  
Corresponding Affymetrix probe sets: 10454984 (MoGene1.0st)   1426496_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000039010
NCBI entrez gene - 67936     See in Manteia.
MGI - MGI:1915186
RefSeq - NM_026464
RefSeq Peptide - NP_080740
swissprot - Q9CX97
Ensembl - ENSMUSG00000042660
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr55ENSDARG00000007217Danio rerio
 WDR55ENSGALG00000029199Gallus gallus
 WDR55ENSG00000120314Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017422  WD repeat protein 55
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IMP
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IMP
 cellular_componentGO:0005737 cytoplasm IMP
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011092 complete embryonic lethality "death of all organisms of a given genotype in a population within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
Show

Allelic Composition: Il4tm1Nnt/Il4tm1Nnt
Genetic Background: C57BL/6-Il4tm1Nnt/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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