ENSMUSG00000042712


Mus musculus

Features
Gene ID: ENSMUSG00000042712
  
Biological name :Tceal9
  
Synonyms : Q9DD24 / Tceal9 / Transcription elongation factor A protein-like 9
  
Possible biological names infered from orthology : Q9UHQ7 / transcription elongation factor A like 9
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: F1
Gene start: 136245079
Gene end: 136247139
  
Corresponding Affymetrix probe sets: 10601854 (MoGene1.0st)   1451230_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047474
Ensembl peptide - ENSMUSP00000108740
NCBI entrez gene - 22381     See in Manteia.
MGI - MGI:109567
RefSeq - NM_011712
RefSeq Peptide - NP_035842
swissprot - Q9DD24
Ensembl - ENSMUSG00000042712
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9UHQ7ENSG00000185222Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q921P9 / Tceal1 / Transcription elongation factor A protein-like 1 / Q15170* / transcription elongation factor A like 1*ENSMUSG0000004953637


Protein motifs (from Interpro)
Interpro ID Name
 IPR021156  Transcription elongation factor A-like/Brain expressed X-linked


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0050699 WW domain binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001539 decreased number of caudal vertebrae "reduced number of the bony segments of the tail" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Srrm4tm1e(EUCOMM)Wtsi/Srrm4tm1e(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Srrm4tm1e(EUCOMM)Wtsi/Wtsi

 MP:0002073 abnormal hair growth "absence or reduced amount of hair or abnormal onset of hair growth cycle or development" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Srrm4tm1e(EUCOMM)Wtsi/Srrm4tm1e(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Srrm4tm1e(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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