ENSMUSG00000042734


Mus musculus

Features
Gene ID: ENSMUSG00000042734
  
Biological name :Ttc9
  
Synonyms : Q3V038 / tetratricopeptide repeat domain 9 / Ttc9
  
Possible biological names infered from orthology : Q92623
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: D1
Gene start: 81631249
Gene end: 81667557
  
Corresponding Affymetrix probe sets: 10396952 (MoGene1.0st)   1436237_at (Mouse Genome 430 2.0 Array)   1455649_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048590
Ensembl peptide - ENSMUSP00000152038
NCBI entrez gene - 69480     See in Manteia.
MGI - MGI:1916730
RefSeq - NM_001033149
RefSeq Peptide - NP_001028321
swissprot - Q3V038
Ensembl - ENSMUSG00000042734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC9ENSDARG00000074363Danio rerio
 TTC9ENSGALG00000017652Gallus gallus
 TTC9ENSG00000133985Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ttc9b / Q9D6E4 / tetratricopeptide repeat domain 9B / Q8N6N2*ENSMUSG0000000794453
Ttc9c / Q810A3 / tetratricopeptide repeat domain 9C / Q8N5M4*ENSMUSG0000007166036


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR023566  Peptidyl-prolyl cis-trans isomerase, FKBP-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060348 bone development IDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000662 abnormal branching of the mammary ductal tree "anomaly in the development of the channels that secrete milk and direct milk to the nipple" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Pcbp1em2Salr/Pcbp1+,Pcbp2tm1.2Salr/Pcbp2+
Genetic Background: involves: 129S4/SvJae * 129S4/SvJaeSor * C57BL/6 * FVB/N

 MP:0000708 thymus hyperplasia "increased cell number in the thymus" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:33401]
Show

Allelic Composition: Pcbp1em2Salr/Pcbp1+,Pcbp2tm1.2Salr/Pcbp2+
Genetic Background: involves: 129S4/SvJae * 129S4/SvJaeSor * C57BL/6 * FVB/N

Allelic Composition: Ttc9tm1Vcl/Ttc9+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

 MP:0001260 increased body weight "greater than normal average weight " [J:33400]
Show

Allelic Composition: Pcbp1em2Salr/Pcbp1+,Pcbp2tm1.2Salr/Pcbp2+
Genetic Background: involves: 129S4/SvJae * 129S4/SvJaeSor * C57BL/6 * FVB/N

 MP:0004952 increased spleen weight "greater than average weight of the organ that functions to filter blood and to store red corpuscles and platelets" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pcbp1em2Salr/Pcbp1+,Pcbp2tm1.2Salr/Pcbp2+
Genetic Background: involves: 129S4/SvJae * 129S4/SvJaeSor * C57BL/6 * FVB/N

 MP:0004955 increased thymus weight "greater than average weight of the primary lymphoid organ that is required for maturation of T cells" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pcbp1em2Salr/Pcbp1+,Pcbp2tm1.2Salr/Pcbp2+
Genetic Background: involves: 129S4/SvJae * 129S4/SvJaeSor * C57BL/6 * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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