ENSMUSG00000042895


Mus musculus

Features
Gene ID: ENSMUSG00000042895
  
Biological name :Abra
  
Synonyms : Abra / actin-binding Rho activating protein / Q8BUZ1
  
Possible biological names infered from orthology : Q8N0Z2
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: B3.1
Gene start: 41864076
Gene end: 41869720
  
Corresponding Affymetrix probe sets: 10428370 (MoGene1.0st)   1458455_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051973
NCBI entrez gene - 223513     See in Manteia.
MGI - MGI:2444891
RefSeq - NM_175456
RefSeq Peptide - NP_780665
swissprot - Q8BUZ1
Ensembl - ENSMUSG00000042895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abrabENSDARG00000033854Danio rerio
 ABRAENSGALG00000041043Gallus gallus
 ABRAENSG00000174429Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026111  Actin-binding Rho-activating protein
 IPR027817  Costars domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0035025 positive regulation of Rho protein signal transduction IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0030016 myofibril IDA
 cellular_componentGO:0030017 sarcomere ISS
 molecular_functionGO:0003779 actin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0003410 abnormal artery development "anomaly in the process of forming the blood vessels that carry blood away from the heart" [J:94740, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Ackr3tm1Twb/Ackr3tm1.1Twb,Tg(Tek-cre)12Flv/0
Genetic Background: involves: 129S/SvEv * BALB/cJ * C3H * C57BL/6

 MP:0005165 increased susceptibility to injury "greater than the normal reaction to trauma, especially that by physical means" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Ackr3tm1Twb/Ackr3tm1.1Twb,Tg(Tek-cre)12Flv/0
Genetic Background: involves: 129S/SvEv * BALB/cJ * C3H * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr