ENSMUSG00000043822


Mus musculus

Features
Gene ID: ENSMUSG00000043822
  
Biological name :Adamtsl5
  
Synonyms : Adamtsl5 / ADAMTS-like 5
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: C1
Gene start: 80339110
Gene end: 80348412
  
Corresponding Affymetrix probe sets: 10370798 (MoGene1.0st)   1420336_at (Mouse Genome 430 2.0 Array)   1438266_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000093097
Ensembl peptide - ENSMUSP00000100989
NCBI entrez gene - 66548     See in Manteia.
MGI - MGI:1913798
RefSeq - XM_011243528
RefSeq - NM_001285435
RefSeq - XM_011243525
RefSeq - XM_011243526
RefSeq - XM_011243527
RefSeq Peptide - NP_001272364
swissprot - Q9CRC7
swissprot - D3Z689
Ensembl - ENSMUSG00000043822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adamtsl5ENSDARG00000052118Danio rerio
 ADAMTSL5ENSGALG00000024298Gallus gallus
 ADAMTSL5ENSG00000185761Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001134  Netrin domain
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR010294  ADAM-TS Spacer 1
 IPR018933  Netrin module, non-TIMP type
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0001527 microfibril ISO
 cellular_componentGO:0005576 extracellular region ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008201 heparin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002764 short tibia " reduced length of the medial and larger bone of the lower leg" [J:12736, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: A830005F24Riktm1.1(KOMP)Mbp/A830005F24Rik+
Genetic Background: C57BL/6N-A830005F24Riktm1.1(KOMP)Mbp/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr