ENSMUSG00000043872


Mus musculus

Features
Gene ID: ENSMUSG00000043872
  
Biological name :Zmym1
  
Synonyms : zinc finger, MYM domain containing 1 / Zmym1
  
Possible biological names infered from orthology : Q5SVZ6 / zinc finger MYM-type containing 1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 127047094
Gene end: 127061152
  
Corresponding Affymetrix probe sets: 10516466 (MoGene1.0st)   1428052_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101705
Ensembl peptide - ENSMUSP00000120772
Ensembl peptide - ENSMUSP00000101708
Ensembl peptide - ENSMUSP00000050669
NCBI entrez gene - 68310     See in Manteia.
MGI - MGI:1915560
RefSeq - XM_006503357
RefSeq - XM_017320375
RefSeq - NM_026670
RefSeq Peptide - NP_080946
swissprot - Q3TJB1
swissprot - A2A7U0
swissprot - A2A7T8
Ensembl - ENSMUSG00000043872
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR762475.1ENSDARG00000098243Danio rerio
 ZMYM1ENSG00000197056Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008906  HAT, C-terminal dimerisation domain
 IPR010507  Zinc finger, MYM-type
 IPR011017  TRASH domain
 IPR012337  Ribonuclease H-like superfamily
 IPR025398  Domain of unknown function DUF4371


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr