ENSMUSG00000044678


Mus musculus

Features
Gene ID: ENSMUSG00000044678
  
Biological name :Ly6k
  
Synonyms : Ly6k / Lymphocyte antigen 6K / Q9CWP4
  
Possible biological names infered from orthology : lymphocyte antigen 6 family member K / Q17RY6
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D3
Gene start: 74796874
Gene end: 74799986
  
Corresponding Affymetrix probe sets: 10429528 (MoGene1.0st)   1452855_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052599
Ensembl peptide - ENSMUSP00000132129
NCBI entrez gene - 76486     See in Manteia.
MGI - MGI:1923736
RefSeq - NM_029627
RefSeq Peptide - NP_083903
swissprot - Q9CWP4
Ensembl - ENSMUSG00000044678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LY6KENSG00000160886Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016054  Ly-6 antigen/uPA receptor-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007339 binding of sperm to zona pellucida IMP
 biological_processGO:0030317 flagellated sperm motility IMP
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045121 membrane raft IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
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Allelic Composition: Cftrtm1Unc/Cftrtm1Unc,Tg(FABPCFTR)1Jaw/0,Tg(Scgb1a1-Scnn1b)6608Bouc/0
Genetic Background: involves: 129P2/OlaHsd * C3H * C57BL/6 * FVB/N

 MP:0004543 abnormal sperm physiology "anomaly in the normal function of spermatozoa" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
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Allelic Composition: Cftrtm1Unc/Cftrtm1Unc,Tg(FABPCFTR)1Jaw/0,Tg(Scgb1a1-Scnn1b)6608Bouc/0
Genetic Background: involves: 129P2/OlaHsd * C3H * C57BL/6 * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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