ENSMUSG00000044768


Mus musculus

Features
Gene ID: ENSMUSG00000044768
  
Biological name :D1Ertd622e
  
Synonyms : D1Ertd622e / DNA segment, Chr 1, ERATO Doi 622, expressed / Q8VEB3
  
Possible biological names infered from orthology : C5orf30 / chromosome 5 open reading frame 30 / Q96GV9
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: D
Gene start: 97606318
Gene end: 97662074
  
Corresponding Affymetrix probe sets: 10356932 (MoGene1.0st)   1417471_s_at (Mouse Genome 430 2.0 Array)   1448721_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051034
Ensembl peptide - ENSMUSP00000121997
Ensembl peptide - ENSMUSP00000137803
Ensembl peptide - ENSMUSP00000138031
NCBI entrez gene - 52392     See in Manteia.
MGI - MGI:1277184
RefSeq - XM_006529752
RefSeq - NM_001355071
RefSeq - NM_001355072
RefSeq - NM_133825
RefSeq - XM_006529748
RefSeq - XM_006529749
RefSeq - XM_006529750
RefSeq - XM_006529751
RefSeq Peptide - NP_001342000
RefSeq Peptide - NP_001342002
RefSeq Peptide - NP_001342003
RefSeq Peptide - NP_598586
RefSeq Peptide - NP_001342001
swissprot - Q8VEB3
swissprot - M0QWF6
Ensembl - ENSMUSG00000044768
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B3DHS1ENSDARG00000093498Danio rerio
 C5orf30ENSGALG00000027512Gallus gallus
 Q96GV9ENSG00000181751Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029219  UNC119-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010764 negative regulation of fibroblast migration IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:1900016 negative regulation of cytokine production involved in inflammatory response IMP
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0035869 ciliary transition zone ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001489 decreased startle reflex "greater threshold or less severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, What s Wrong With My Mouse?:ISBN 0-471-31639-3]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0005560 decreased circulating glucose level "less than the normal concentration in the blood of this major monosaccharide of the body; it is an important energy source" [RGD:Rat Genome Database submission, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0005627 increased circulating potassium level "greater than the normal concentration in the blood of this alkaline metallic element, the most abundant intracellular ion; anomalies in the extracellular (circulating) concentration have important implications for the function of excitable tissues, such as nerve and muscle" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0005633 increased circulating sodium level "greater than the normal concentration in the blood of this metallic element, the most plentiful extracellular ion in the body and the principal determinant of extracellular fluid volume" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, RGD:Rat Genome Database submission]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

 MP:0013278 decreased fasted circulating glucose level "reduction in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]
Show

Allelic Composition: Cyp27b1tm1b(EUCOMM)Hmgu/Cyp27b1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Cyp27b1tm1b(EUCOMM)Hmgu/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr