ENSMUSG00000047417


Mus musculus

Features
Gene ID: ENSMUSG00000047417
  
Biological name :Rexo1
  
Synonyms : Q7TT28 / Rexo1 / RNA exonuclease 1 homolog
  
Possible biological names infered from orthology : Q8N1G1
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: C1
Gene start: 80540922
Gene end: 80561560
  
Corresponding Affymetrix probe sets: 10370892 (MoGene1.0st)   1429124_s_at (Mouse Genome 430 2.0 Array)   1429489_at (Mouse Genome 430 2.0 Array)   1457116_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000049705
Ensembl peptide - ENSMUSP00000138329
Ensembl peptide - ENSMUSP00000138493
Ensembl peptide - ENSMUSP00000138616
NCBI entrez gene - 66932     See in Manteia.
MGI - MGI:1914182
RefSeq - XM_011243531
RefSeq - NM_025852
RefSeq - XM_006513961
RefSeq - XM_011243530
RefSeq Peptide - NP_080128
swissprot - S4R246
swissprot - S4R2E9
swissprot - Q7TT28
swissprot - S4R1Q7
Ensembl - ENSMUSG00000047417
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rexo1ENSDARG00000026986Danio rerio
 REXO1ENSGALG00000001043Gallus gallus
 REXO1ENSG00000079313Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily
 IPR013520  Exonuclease, RNase T/DNA polymerase III
 IPR031736  Elongin A binding-protein 1
 IPR034922  RNA exonuclease 1-like, exonuclease domain
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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