ENSMUSG00000047735


Mus musculus

Features
Gene ID: ENSMUSG00000047735
  
Biological name :Samd9l
  
Synonyms : Samd9l / sterile alpha motif domain containing 9 like
  
Possible biological names infered from orthology : Q8IVG5
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: A1
Gene start: 3372257
Gene end: 3399572
  
Corresponding Affymetrix probe sets: 10542911 (MoGene1.0st)   1460603_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144632
Ensembl peptide - ENSMUSP00000112688
NCBI entrez gene - 209086     See in Manteia.
MGI - MGI:1343184
RefSeq - NM_010156
RefSeq - XM_006505026
RefSeq Peptide - NP_034286
swissprot - E9PX59
swissprot - V9GX63
Ensembl - ENSMUSG00000047735
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD9ENSDARG00000102729Danio rerio
 ENSGALG00000009479Gallus gallus
 Q8IVG5ENSG00000177409Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000218 increased WBC count "greater than normal WBC numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0000222 decreased neutrophil count "fewer than normal neutrophil numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0000245 abnormal erythropoiesis "atypical process of red blood cell formation" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0000321 increased bone marrow cell number "increased number of cells that make up the core cavitites of bones when compared to the norm" [tc:Teresa Chu , Mouse Genome Informatics Curator]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0000691 enlarged spleen "increased spleen size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0001577 anemia "less than normal levels of red blood cells, hemoglobin or volume of packed red blood cells " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:53370]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0001601 abnormal myelopoiesis "atypical process of bone marrow cell formation and/or bone marrow-derived blood cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:tc]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0002026 leukemia "progressive proliferation of abnormal leukocytes in hematopoietic tissues, organs and blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:18542]
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Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

Allelic Composition: Samd9ltm1Homy/Samd9ltm1Homy
Genetic Background: B6N.129P2-Samd9ltm1Homy

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0002098 abnormal vibrissae morphology "irregular or unusual structure, appearance, or alignment of the vibrissae" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Socs2tm1Vem/Socs2tm1Vem
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0002123 abnormal hematopoiesis "abnormal development of the enucleated fetal and adult erythrocytes that develop in the aorta, genital ridge and mesonephros region and later in the fetal and adult liver" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0002417 abnormal megakaryocyte morphology/development "anomalous structure or formation of the very large cells found in the bone marrow that release platelets" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0002418 increased susceptibility to viral infection "greater likelihood that an organism will develop ill effects from a viral infection or from components of or toxins produced by a virus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0002641 anisopoikilocytosis "presence in blood of RBCs of abnormal shapes and sizes" [J:78271, cwg:Carroll W. Goldsmith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0003195 calcinosis "pathologic deposition of calcium salts in tissues " [MeSH:National Library of Medicine - Medical Subject Headings , 2003, RGD:Rat Genome Database submission]
Show

Allelic Composition: Socs2tm1Vem/Socs2tm1Vem
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0005065 abnormal neutrophil morphology "structural anomaly of the granular leukocytes that have a three- to five-lobed nucleus and a cytoplasm that contains inconspicuous granules stainable by neutral dyes" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0005097 polychromatophilia "condition characterized by the presence of red blood cells that have an affinity for acid, basic, and neutral stains" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:305]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0010178 increased number of Howell-Jolly bodies "abnormal presence of basophilic nuclear remnants of condensed DNA (1 to 2 um in diameter) in circulating erythrocytes, typically seen in severe hemolytic anemias or after splenectomy; these inclusions are normally removed by the spleen but will persist in individuals with functional hyposplenia or asplenia" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0011176 abnormal erythroblast morphology "any structural anomaly of the nucleated precursor of erythrocytes" [ISBN:0-683-40008-8]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0012563 increased tumor incidence following infection "greater than the expected number of neoplasms in a specific population after infection with a pathogen in a given time period, usually of a specific type" [http://orcid.org/0000-0001-5208-3432]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

 MP:0030025 giant platelets "presence of abnormally enlarged platelets that are as large as or larger than the red blood cells in the microscopic field; giant platelets may be seen in myeloproliferative and myelodysplastic conditions, autoimmune thrombocytopenia, in association with severe leukemoid reactions, and in rare inherited conditions such as Bernard-Soulier syndrome" [HP:0001902, https://www.labce.com/spg498392_giant_platelets.aspx]
Show

Allelic Composition: Gt(ROSA)26Sortm16Sia/Gt(ROSA)26Sortm16Sia
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj

Allelic Composition: Samd9ltm1Homy/Samd9l+
Genetic Background: involves: 129P2/OlaHsd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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