ENSMUSG00000047786


Mus musculus

Features
Gene ID: ENSMUSG00000047786
  
Biological name :Lix1
  
Synonyms : Lix1 / Protein limb expression 1 homolog / Q6P566
  
Possible biological names infered from orthology : limb and CNS expressed 1 / Q8N485
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A3.1
Gene start: 17402672
Gene end: 17459387
  
Corresponding Affymetrix probe sets: 10442069 (MoGene1.0st)   1421180_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000111239
NCBI entrez gene - 66643     See in Manteia.
MGI - MGI:1913893
RefSeq - NM_025681
RefSeq Peptide - NP_079957
swissprot - A0A158RFU7
swissprot - Q6P566
Ensembl - ENSMUSG00000047786
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lix1ENSDARG00000052154Danio rerio
 LIX1ENSGALG00000015290Gallus gallus
 LIX1ENSG00000145721Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lix1l / limb and CNS expressed 1 like / Q8IVB5*ENSMUSG0000004928852


Protein motifs (from Interpro)
Interpro ID Name
 IPR029270  Limb expression 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097352 autophagosome maturation IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gt(ROSA)26Sortm1(cre/ERT2)Thl/Gt(ROSA)26Sor+,Id1tm3Bene/Id1tm3Bene,Id2tm1Xdz/Id2tm1Xdz,Id3tm1Zhu/Id3tm1Zhu
Genetic Background: involves: 129S4/SvJaeSor * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr