ENSMUSG00000047989


Mus musculus

Features
Gene ID: ENSMUSG00000047989
  
Biological name :Ino80c
  
Synonyms : Ino80c / INO80 complex subunit C / Q8BHA0
  
Possible biological names infered from orthology : AC007998.2 / Q6PI98
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: A2
Gene start: 24104757
Gene end: 24121953
  
Corresponding Affymetrix probe sets: 10457853 (MoGene1.0st)   1433859_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114643
Ensembl peptide - ENSMUSP00000122372
Ensembl peptide - ENSMUSP00000117684
Ensembl peptide - ENSMUSP00000055342
NCBI entrez gene - 225280     See in Manteia.
MGI - MGI:2443014
RefSeq - NM_172625
RefSeq Peptide - NP_766213
swissprot - D3Z3N1
swissprot - F8WIA0
swissprot - D3Z6F3
swissprot - Q8BHA0
Ensembl - ENSMUSG00000047989
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ino80cENSDARG00000055719Danio rerio
 ENSGALG00000013137Gallus gallus
 AC007998.2ENSG00000267140Homo sapiens
 INO80CENSG00000153391Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013272  Vps72/YL1, C-terminal
 IPR029525  INO80 complex, subunit Ies6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 cellular_componentGO:0001650 fibrillar center ISO
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031011 Ino80 complex IEA
 cellular_componentGO:0071339 MLL1 complex ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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