ENSMUSG00000048004


Mus musculus

Features
Gene ID: ENSMUSG00000048004
  
Biological name :Tmem196
  
Synonyms : Tmem196 / transmembrane protein 196 isoform 3
  
Possible biological names infered from orthology : Q5HYL7 / transmembrane protein 196
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: F2
Gene start: 119945822
Gene end: 120021246
  
Corresponding Affymetrix probe sets: 10399208 (MoGene1.0st)   10399212 (MoGene1.0st)   1456233_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000138921
Ensembl peptide - ENSMUSP00000139022
Ensembl peptide - ENSMUSP00000139033
Ensembl peptide - ENSMUSP00000054994
Ensembl peptide - ENSMUSP00000138937
NCBI entrez gene - 217951     See in Manteia.
MGI - MGI:2685374
RefSeq - XM_006515787
RefSeq - NM_001160385
RefSeq - NM_001294146
RefSeq - NM_001294154
RefSeq Peptide - NP_001153857
RefSeq Peptide - NP_001281075
RefSeq Peptide - NP_001281083
swissprot - V9GX04
swissprot - V9GX16
swissprot - V9GX78
swissprot - V9GX84
swissprot - D3YWQ9
Ensembl - ENSMUSG00000048004
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM196 (1 of many)ENSDARG00000114159Danio rerio
 tmem196bENSDARG00000090140Danio rerio
 TMEM196ENSGALG00000010865Gallus gallus
 Q5HYL7ENSG00000173452Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr