ENSMUSG00000048100


Mus musculus

Features
Gene ID: ENSMUSG00000048100
  
Biological name :Taf13
  
Synonyms : P61216 / Taf13 / Transcription initiation factor TFIID subunit 13
  
Possible biological names infered from orthology : Q15543 / TATA-box binding protein associated factor 13
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F3
Gene start: 108571698
Gene end: 108583222
  
Corresponding Affymetrix probe sets: 10375973 (MoGene1.0st)   10495340 (MoGene1.0st)   1448707_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121346
NCBI entrez gene - 99730     See in Manteia.
MGI - MGI:1913500
RefSeq - NM_025444
RefSeq Peptide - NP_079720
swissprot - P61216
Ensembl - ENSMUSG00000048100
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf13ENSDARG00000070834Danio rerio
 TAF13ENSGALG00000015185Gallus gallus
 TAF13ENSG00000197780Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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