ENSMUSG00000048617


Mus musculus

Features
Gene ID: ENSMUSG00000048617
  
Biological name :Rtbdn
  
Synonyms : Mus musculus retbindin (Rtbdn), transcript variant 1, mRNA. / Q8QZY4 / Rtbdn
  
Possible biological names infered from orthology : Q9BSG5 / retbindin
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: C3
Gene start: 84946991
Gene end: 84956603
  
Corresponding Affymetrix probe sets: 10573472 (MoGene1.0st)   1451603_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000070558
Ensembl peptide - ENSMUSP00000105362
Ensembl peptide - ENSMUSP00000113982
Ensembl peptide - ENSMUSP00000132841
NCBI entrez gene - 234542     See in Manteia.
MGI - MGI:2443686
RefSeq - XM_006530865
RefSeq - NM_001357326
RefSeq - NM_144929
RefSeq Peptide - NP_001344255
RefSeq Peptide - NP_001344257
RefSeq Peptide - NP_659178
swissprot - Q8QZY4
swissprot - E9PXB4
Ensembl - ENSMUSG00000048617
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTBDNENSG00000132026Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004269  Folate receptor
 IPR018143  Folate receptor-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019897 extrinsic component of plasma membrane IDA
 cellular_componentGO:0033165 interphotoreceptor matrix IEA
 molecular_functionGO:1902444 riboflavin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ush1ctm1a(KOMP)Wtsi/Ush1ctm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Ush1ctm1a(KOMP)Wtsi/Wtsi

 MP:0005103 abnormal retinal pigmentation "anomalous coloring of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Ush1ctm1a(KOMP)Wtsi/Ush1ctm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Ush1ctm1a(KOMP)Wtsi/Wtsi

 MP:0005505 increased platelet count "greater than the normal numbers of the non-nucleated cells found in the blood and involved in blood coagulation " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ush1ctm1a(KOMP)Wtsi/Ush1ctm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Ush1ctm1a(KOMP)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr