ENSMUSG00000049436


Mus musculus

Features
Gene ID: ENSMUSG00000049436
  
Biological name :Upk1b
  
Synonyms : Q9Z2C6 / Upk1b / uroplakin 1B
  
Possible biological names infered from orthology : O75841
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B4
Gene start: 38773184
Gene end: 38800203
  
Corresponding Affymetrix probe sets: 10439500 (MoGene1.0st)   1435831_at (Mouse Genome 430 2.0 Array)   1439760_x_at (Mouse Genome 430 2.0 Array)   1455464_x_at (Mouse Genome 430 2.0 Array)   1457065_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052469
NCBI entrez gene - 22268     See in Manteia.
MGI - MGI:98912
RefSeq - NM_178924
RefSeq - XM_017316943
RefSeq Peptide - NP_849255
swissprot - Q9Z2C6
Ensembl - ENSMUSG00000049436
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UPK1BENSGALG00000015079Gallus gallus
 UPK1BENSG00000114638Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Upk1a / Q9D132 / uroplakin 1A / O00322*ENSMUSG0000000631336


Protein motifs (from Interpro)
Interpro ID Name
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR034766  Uroplakin-1b


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0030855 epithelial cell differentiation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Myo1etm1.1Flv/Myo1etm1.1Flv
Genetic Background: involves: 129S6/SvEvTac

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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