ENSMUSG00000050410


Mus musculus

Features
Gene ID: ENSMUSG00000050410
  
Biological name :Tcf19
  
Synonyms : Tcf19 / transcription factor 19
  
Possible biological names infered from orthology : Q9Y242
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 35512734
Gene end: 35516824
  
Corresponding Affymetrix probe sets: 10450519 (MoGene1.0st)   1423809_at (Mouse Genome 430 2.0 Array)   1443795_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125310
Ensembl peptide - ENSMUSP00000125659
Ensembl peptide - ENSMUSP00000124449
Ensembl peptide - ENSMUSP00000125167
NCBI entrez gene - 106795     See in Manteia.
MGI - MGI:103180
RefSeq - NM_025674
RefSeq - NM_001163764
RefSeq - NM_001163763
RefSeq Peptide - NP_079950
RefSeq Peptide - NP_001157235
RefSeq Peptide - NP_001157236
swissprot - E0CY69
swissprot - G3XA31
swissprot - E0CZ64
Ensembl - ENSMUSG00000050410
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcf19lENSDARG00000040036Danio rerio
 TCF19ENSG00000137310Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR008984  SMAD/FHA domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005178 increased total circulating cholesterol level "greater than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

 MP:0005179 decreased total circulating cholesterol level "less than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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