ENSMUSG00000050671


Mus musculus

Features
Gene ID: ENSMUSG00000050671
  
Biological name :Ism2
  
Synonyms : Ism2 / isthmin 2
  
Possible biological names infered from orthology : Q6H9L7
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D2
Gene start: 87278638
Gene end: 87299705
  
Corresponding Affymetrix probe sets: 10401774 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000053451
Ensembl peptide - ENSMUSP00000117108
NCBI entrez gene - 217738     See in Manteia.
MGI - MGI:2685110
RefSeq - NM_001290302
RefSeq Peptide - NP_001277231
swissprot - F6YQQ5
swissprot - D3Z6A3
Ensembl - ENSMUSG00000050671
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ism2aENSDARG00000089691Danio rerio
 ism2bENSDARG00000053859Danio rerio
 ISM2ENSGALG00000010468Gallus gallus
 ISM2ENSG00000100593Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ism1 / A2ATD1 / Isthmin-1 / B1AKI9*ENSMUSG0000007476638


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR005533  AMOP domain
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
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Allelic Composition: Fgf3tm4b(EUCOMM)Hmgu/Fgf3tm4b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Fgf3tm4b(EUCOMM)Hmgu/Bay

 MP:0003929 decreased heart rate variability "reduced variation of beat-to-beat intervals of the heart, usually indicitive of cardiac disease" [RGD:Rat Genome Database submission]
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Allelic Composition: Fgf3tm4b(EUCOMM)Hmgu/Fgf3tm4b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Fgf3tm4b(EUCOMM)Hmgu/Bay

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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