ENSMUSG00000050875


Mus musculus

Features
Gene ID: ENSMUSG00000050875
  
Biological name :A730017C20Rik
  
Synonyms : A730017C20Rik / UPF0258 isoform c
  
Possible biological names infered from orthology : KIAA1024L / KIAA1024 like / P59773
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: D3
Gene start: 59062248
Gene end: 59076962
  
Corresponding Affymetrix probe sets: 10455942 (MoGene1.0st)   1433577_at (Mouse Genome 430 2.0 Array)   1437528_x_at (Mouse Genome 430 2.0 Array)   1444082_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135020
Ensembl peptide - ENSMUSP00000125952
Ensembl peptide - ENSMUSP00000135330
Ensembl peptide - ENSMUSP00000056379
Ensembl peptide - ENSMUSP00000113023
Ensembl peptide - ENSMUSP00000113487
NCBI entrez gene - 225583     See in Manteia.
MGI - MGI:2442934
RefSeq - XM_006525878
RefSeq - NM_001167925
RefSeq - NM_173759
RefSeq - XM_006525876
RefSeq Peptide - NP_776120
RefSeq Peptide - NP_001161397
swissprot - A0A0R4J0Q0
swissprot - H3BJK3
swissprot - I1E4Y1
swissprot - E9Q5J6
Ensembl - ENSMUSG00000050875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR790388.1ENSDARG00000078922Danio rerio
 KIAA1024LENSGALG00000027692Gallus gallus
 P59773ENSG00000186367Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8K3V7 / AF529169 / UPF0258 protein KIAA1024 / Q9UPX6* / KIAA1024*ENSMUSG0000003931335


Protein motifs (from Interpro)
Interpro ID Name
 IPR009626  Uncharacterised protein family UPF0258


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004647 decreased lumbar vertebrae number "reduced number of the six bony segments of the spine located anterior to the sacral vertebrae and posterior to the thoracic vertebrae" [MESH:National Library of Medicine_Medical Subject Headings]
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Allelic Composition: Col1a1tm20(tetO-GFP,-cas9*D10A)Slowe/Col1a1+,Gt(ROSA)26Sortm1(rtTA*M2)Jae/Gt(ROSA)26Sor+
Genetic Background: involves: 129S4/SvJae * C57BL/6

 MP:0010101 increased sacral vertebrae number "increase of any or all of the four bony segments of the spine located posterior to the lumbar vertebrae and anterior to the caudal vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col1a1tm20(tetO-GFP,-cas9*D10A)Slowe/Col1a1+,Gt(ROSA)26Sortm1(rtTA*M2)Jae/Gt(ROSA)26Sor+
Genetic Background: involves: 129S4/SvJae * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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