ENSMUSG00000053128


Mus musculus

Features
Gene ID: ENSMUSG00000053128
  
Biological name :Rnf26
  
Synonyms : E3 ubiquitin-protein ligase RNF26 / Q8BUH7 / Rnf26
  
Possible biological names infered from orthology : Q9BY78 / ring finger protein 26
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A5.1
Gene start: 44095631
Gene end: 44113517
  
Corresponding Affymetrix probe sets: 10545534 (MoGene1.0st)   10592727 (MoGene1.0st)   1423650_at (Mouse Genome 430 2.0 Array)   1436824_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124568
Ensembl peptide - ENSMUSP00000150766
Ensembl peptide - ENSMUSP00000148925
Ensembl peptide - ENSMUSP00000070060
Ensembl peptide - ENSMUSP00000110478
NCBI entrez gene - 213211     See in Manteia.
MGI - MGI:2388131
RefSeq - NM_153762
RefSeq Peptide - NP_717095
swissprot - A0A1L1SQ68
swissprot - H9KV16
swissprot - A0A1L1SUH0
swissprot - Q8BUH7
Ensembl - ENSMUSG00000053128
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf26ENSDARG00000074074Danio rerio
 RNF26ENSGALG00000044805Gallus gallus
 RNF26ENSG00000173456Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rnf26 / Q8BUH7 / E3 ubiquitin-protein ligase RNF26 / Q9BY78* / ring finger protein 26*ENSMUSG00000111409100
Gm9008 / RNF26* / Q9BY78* / ring finger protein 26*ENSMUSG0000007247699


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007032 endosome organization ISS
 biological_processGO:0016567 protein ubiquitination ISO
 biological_processGO:0032479 regulation of type I interferon production ISO
 biological_processGO:0050687 negative regulation of defense response to virus ISS
 biological_processGO:0070979 protein K11-linked ubiquitination ISO
 biological_processGO:1905719 protein localization to perinuclear region of cytoplasm ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr