ENSMUSG00000054034


Mus musculus

Features
Gene ID: ENSMUSG00000054034
  
Biological name :Tceal5
  
Synonyms : Q8CCT4 / Tceal5 / transcription elongation factor A (SII)-like 5
  
Possible biological names infered from orthology : Q5H9L2 / Q6IPX3 / Q969E4 / TCEAL3 / TCEAL6 / transcription elongation factor A like 3 / transcription elongation factor A like 5 / transcription elongation factor A like 6
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F1
Gene start: 136200948
Gene end: 136203876
  
Corresponding Affymetrix probe sets: 10606864 (MoGene1.0st)   1450961_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114653
Ensembl peptide - ENSMUSP00000118630
Ensembl peptide - ENSMUSP00000065397
NCBI entrez gene - 331532     See in Manteia.
MGI - MGI:3036236
RefSeq - NM_177919
RefSeq - XM_006528576
RefSeq Peptide - NP_808587
swissprot - A2AJS2
swissprot - Q14C38
swissprot - Q8CCT4
swissprot - A2AJS1
Ensembl - ENSMUSG00000054034
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5H9L2ENSG00000204065Homo sapiens
 Q6IPX3ENSG00000204071Homo sapiens
 Q969E4ENSG00000196507Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tceal3 / Q8R0A5 / Mus musculus transcription elongation factor A (SII)-like 3 (Tceal3), transcript variant 2, mRNA. / Q969E4* / Q5H9L2* / TCEAL5* / TCEAL6* / Q6IPX3* / transcription elongat...ENSMUSG0000004455078
Tceal6 / transcription elongation factor A (SII)-like 6 / Q969E4* / TCEAL3* / TCEAL5* / Q6IPX3* / Q5H9L2* / transcription elongation factor A like 5* / transcription elongation factor A lik...ENSMUSG0000003140978


Protein motifs (from Interpro)
Interpro ID Name
 IPR021156  Transcription elongation factor A-like/Brain expressed X-linked


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006414 translational elongation IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0050699 WW domain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0010123 increased bone mineral content "elevation in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Spata22tm1b(KOMP)Wtsi/Spata22tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Spata22tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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