ENSMUSG00000056234


Mus musculus

Features
Gene ID: ENSMUSG00000056234
  
Biological name :Ncoa4
  
Synonyms : Ncoa4 / nuclear receptor coactivator 4 isoform b
  
Possible biological names infered from orthology : nuclear receptor coactivator 4 / Q13772
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: B
Gene start: 32159865
Gene end: 32179855
  
Corresponding Affymetrix probe sets: 10399198 (MoGene1.0st)   10413839 (MoGene1.0st)   1420808_at (Mouse Genome 430 2.0 Array)   1450006_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126222
Ensembl peptide - ENSMUSP00000154536
Ensembl peptide - ENSMUSP00000131253
Ensembl peptide - ENSMUSP00000129917
Ensembl peptide - ENSMUSP00000129422
Ensembl peptide - ENSMUSP00000128739
Ensembl peptide - ENSMUSP00000126780
Ensembl peptide - ENSMUSP00000107625
Ensembl peptide - ENSMUSP00000126071
NCBI entrez gene - 27057     See in Manteia.
MGI - MGI:1350932
RefSeq - XM_017316028
RefSeq - NM_001033988
RefSeq - NM_001284319
RefSeq - NM_019744
RefSeq - XM_006519067
RefSeq - XM_006519068
RefSeq Peptide - NP_001029160
RefSeq Peptide - NP_001271248
RefSeq Peptide - NP_062718
swissprot - E9Q0D2
swissprot - E9PZ59
swissprot - E9PWU9
swissprot - E9PVM8
swissprot - E9Q2H3
swissprot - Q5U4H9
swissprot - E9Q8Q4
Ensembl - ENSMUSG00000056234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncoa4ENSDARG00000021439Danio rerio
 NCOA4ENSGALG00000002066Gallus gallus
 NCOA4ENSG00000266412Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022174  Nuclear coactivator


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006622 protein targeting to lysosome ISO
 biological_processGO:0006879 cellular iron ion homeostasis IMP
 biological_processGO:0009725 response to hormone IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0044754 autolysosome ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008008 early cellular replicative senescence "increase in the progression of the process in which a cell progresses from its inception to the end of its lifespan, which occurs as the cell continues cycles of growth and division" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Mapk1tm1Gela/Mapk1tm1Gela,Mapk3tm1Gela/Mapk3tm1Gela,H2afvTg(Wnt1-cre)11Rth/0
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * CBA/J

 MP:0008057 abnormal DNA replication "any anomaly in the process whereby new strands of DNA are synthesized" [GO:0006260]
Show

Allelic Composition: Mapk1tm1Gela/Mapk1tm1Gela,Mapk3tm1Gela/Mapk3tm1Gela,H2afvTg(Wnt1-cre)11Rth/0
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * CBA/J

 MP:0011704 decreased fibroblast proliferation "reduction in the expansion rate of a fibroblast cell population by cell division" [MGI:csmith]
Show

Allelic Composition: Mapk1tm1Gela/Mapk1tm1Gela,Mapk3tm1Gela/Mapk3tm1Gela,H2afvTg(Wnt1-cre)11Rth/0
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * CBA/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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