ENSMUSG00000056260


Mus musculus

Features
Gene ID: ENSMUSG00000056260
  
Biological name :Lrif1
  
Synonyms : Ligand-dependent nuclear receptor-interacting factor 1 / Lrif1 / Q8CDD9
  
Possible biological names infered from orthology : Q5T3J3
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.3
Gene start: 106684987
Gene end: 106736577
  
Corresponding Affymetrix probe sets: 10495173 (MoGene1.0st)   1428162_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115110
Ensembl peptide - ENSMUSP00000114163
Ensembl peptide - ENSMUSP00000119815
Ensembl peptide - ENSMUSP00000120350
Ensembl peptide - ENSMUSP00000096346
Ensembl peptide - ENSMUSP00000096347
Ensembl peptide - ENSMUSP00000102347
NCBI entrez gene - 321000     See in Manteia.
MGI - MGI:2445214
RefSeq - XM_017319616
RefSeq - NM_001039478
RefSeq - NM_001039488
RefSeq - NM_001286685
RefSeq - NM_028081
RefSeq - XM_006501581
RefSeq - XM_006501583
RefSeq - XM_006501584
RefSeq - XM_011240140
RefSeq Peptide - NP_001273614
RefSeq Peptide - NP_082357
RefSeq Peptide - NP_001034577
RefSeq Peptide - NP_001034567
swissprot - D3Z005
swissprot - Q8CDD9
swissprot - D3YWW6
swissprot - D3Z1H3
swissprot - G3X9P5
swissprot - G5E8M8
Ensembl - ENSMUSG00000056260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-261n11.5ENSDARG00000069696Danio rerio
 ENSGALG00000000106Gallus gallus
 ENSGALG00000033992Gallus gallus
 LRIF1ENSG00000121931Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026191  Ligand-dependent nuclear receptor-interacting factor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0042974 retinoic acid receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr