ENSMUSG00000056429


Mus musculus

Features
Gene ID: ENSMUSG00000056429
  
Biological name :Tgoln1
  
Synonyms : Q62313 / Tgoln1 / trans-golgi network protein
  
Possible biological names infered from orthology : O43493 / TGOLN2 / trans-golgi network protein 2
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: C1
Gene start: 72608432
Gene end: 72617000
  
Corresponding Affymetrix probe sets: 10545450 (MoGene1.0st)   1418520_at (Mouse Genome 430 2.0 Array)   1423307_s_at (Mouse Genome 430 2.0 Array)   1423308_at (Mouse Genome 430 2.0 Array)   1423309_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000068487
NCBI entrez gene - 22134     See in Manteia.
MGI - MGI:105080
RefSeq - NM_009443
RefSeq Peptide - NP_033469
swissprot - Q4FJY3
swissprot - Q62313
Ensembl - ENSMUSG00000056429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch1073-392o20.2ENSDARG00000102599Danio rerio
 O43493ENSG00000152291Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026084  Trans-Golgi network integral membrane protein TGN38


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006895 Golgi to endosome transport IBA
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005802 trans-Golgi network ISO
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030140 trans-Golgi network transport vesicle IBA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Golgi Associated Vesicle Biogenesis
Retrograde transport at the Trans-Golgi-Network
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr