ENSMUSG00000058159


Mus musculus

Features
Gene ID: ENSMUSG00000058159
  
Biological name :T2
  
Synonyms : brachyury 2 / T2
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A1
Gene start: 8372396
Gene end: 8422728
  
Corresponding Affymetrix probe sets: 10441660 (MoGene1.0st)   1421558_at (Mouse Genome 430 2.0 Array)   
  
Cross references: NCBI entrez gene - 21331     See in Manteia.
MGI - MGI:104658
Ensembl - ENSMUSG00000058159
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000267 abnormal cardiac development "aberrant formation or incomplete differentiation of the heart" [MGI:cls, J:53370]
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Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0000270 abnormal heart tube morphology "malformed embryonic heart " [J:37888]
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Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0000585 kinked tail "a sharp bend or zig-zag in the tail" [J:61295]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0000592 short tail "reduced length of tail compared to control " [J:55583]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0000932 absent notochord "missing axial fibrocellular cord in embryos around which develops the vertebral primordia" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:12622]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0003456 absent tail "completely lacking the appendage at the caudal end of the vertebral column " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Cd14tm1Smg/Cd14tm1Smg
Genetic Background: involves: 129S1/Sv * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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