ENSMUSG00000059482


Mus musculus

Features
Gene ID: ENSMUSG00000059482
  
Biological name :2610301B20Rik
  
Synonyms : 2610301B20Rik / chromosome 8 open reading frame 37 / Q3UJP5
  
Possible biological names infered from orthology : C8orf37 / Q96NL8
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A1
Gene start: 10874498
Gene end: 10899425
  
Corresponding Affymetrix probe sets: 10503251 (MoGene1.0st)   1429451_at (Mouse Genome 430 2.0 Array)   1443280_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103966
Ensembl peptide - ENSMUSP00000079361
NCBI entrez gene - 67157     See in Manteia.
MGI - MGI:1914407
RefSeq - NM_026005
RefSeq Peptide - NP_080281
swissprot - B1AV75
swissprot - Q3UJP5
Ensembl - ENSMUSG00000059482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C8orf37ENSGALG00000038971Gallus gallus
 Q96NL8ENSG00000156172Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029239  C8orf37 protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0097546 ciliary base IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001004 abnormal photoreceptor morphology "structural or developmental anomaly of the receptors sensitive to light " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0001326 retinal degeneration "pathological change in the thin layer of neural tissue lining the back of the eyeball, which contains visual receptors and can result in the impairment or cessation of retinal neural function" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0001327 reduced retinal photoreceptor cell number "fewer than the expected number of rods and/or cones" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0003729 abnormal photoreceptor outer segments "malformation/anomalous structure of the photoreceptor layer which contains stacks of membranous discs that are rich in the visual pigment rhodopsin " [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0004021 abnormal rod electrophysiology "anomaly in the function of dark adapted vision mediated by the rods" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0004022 abnormal cone electrophysiology "anomaly in the function of light adapted vision mediated by the cones" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0008515 thin retinal outer nuclear layer "reduced thickness of the retinal layer that contains the nuclei and cell bodies of rods and cones" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0008587 short photoreceptor outer segment "decreased length of the photoreceptor region that is rich in the visual pigment rhodopsin" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0011965 decreased total retina thickness "decreased width of the retina through the center plane" [MGI:csmith]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0012029 abnormal electroretinogram waveform feature "any anomaly in the pattern of the graphic record of the integrated ensemble response from many vision related neuronal and glial populations as a consequence of the serial processing within the retina, represented as changes in voltage over time after visual photonic stimulation" [MGI:csmith]
Show

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0012143 decreased a wave amplitude "reduction in the size (height or maximum displacement) of the a wave as measured in the electroretinogram" [MGI:csmith]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

Allelic Composition: 2610301B20Rikem3Jyang/2610301B20Rikem3Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0012144 decreased b wave amplitude "reduction in the size (height or maximum displacement) of the b wave as measured in the electroretinogram" [MGI:csmith]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

Allelic Composition: 2610301B20Rikem3Jyang/2610301B20Rikem3Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0012147 increased a wave implicit time "increase in the time from the onset of light stimulus to the peak of the a wave" [MGI:smb]
Show

Allelic Composition: Cfap44em1Pfr/Cfap44+
Genetic Background: involves: C57BL/6J

Allelic Composition: 2610301B20Rikem2Jyang/2610301B20Rikem2Jyang
Genetic Background: involves: C57BL/6 * CBA

Allelic Composition: 2610301B20Rikem3Jyang/2610301B20Rikem3Jyang
Genetic Background: involves: C57BL/6 * CBA

 MP:0012150 increased b wave implicit time "increase in the time from the onset of light stimulus to the peak of the b wave" [MGI:smb]
Show

Allelic Composition: 2610301B20Rikem3Jyang/2610301B20Rikem3Jyang
Genetic Background: involves: C57BL/6 * CBA

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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