ENSMUSG00000059939


Mus musculus

Features
Gene ID: ENSMUSG00000059939
  
Biological name :9430015G10Rik
  
Synonyms : 9430015G10Rik / RIKEN cDNA 9430015G10 gene
  
Possible biological names infered from orthology : C1orf159 / chromosome 1 open reading frame 159 / Q96HA4
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: E2
Gene start: 156109982
Gene end: 156127265
  
Corresponding Affymetrix probe sets: 10511298 (MoGene1.0st)   1424555_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000072366
Ensembl peptide - ENSMUSP00000101201
Ensembl peptide - ENSMUSP00000131817
NCBI entrez gene - 230996     See in Manteia.
MGI - MGI:2444364
RefSeq - XM_006538834
RefSeq - NM_145557
RefSeq - NM_177205
RefSeq Peptide - NP_663532
RefSeq Peptide - NP_796179
swissprot - Q8BSD8
swissprot - A2ASP7
Ensembl - ENSMUSG00000059939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-157b11.12ENSDARG00000086336Danio rerio
 C1orf159ENSGALG00000027363Gallus gallus
 Q96HA4ENSG00000131591Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027888  Protein of unknown function DUF4501


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001973 increased thermal nociceptive threshold "a greater than average point at which thermal pain sensation is first detectable" [What s Wrong With My Mouse?:ISBN 0-471-31639-3, J:17194]
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Allelic Composition: Sox11tm1.1Gan/Sox11tm1.1Gan,Tg(EIIa-cre)C5379Lmgd/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * FVB/N

 MP:0005014 increased B cell number "greater than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Sox11tm1.1Gan/Sox11tm1.1Gan,Tg(EIIa-cre)C5379Lmgd/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * FVB/N

 MP:0008075 decreased CD4-positive T cell number "reduced number of the subset of T lymphocytes that carry the CD4 marker, recognize intravesicular peptides bound to MHC class-II molecules, and turn on antibody production" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Sox11tm1.1Gan/Sox11tm1.1Gan,Tg(EIIa-cre)C5379Lmgd/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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