ENSMUSG00000060371


Mus musculus

Features
Gene ID: ENSMUSG00000060371
  
Biological name :Caln1
  
Synonyms : Calcium-binding protein 8 / Caln1 / Q9JJG7
  
Possible biological names infered from orthology : calneuron 1 / Q9BXU9
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: G1.3
Gene start: 130369455
Gene end: 130847412
  
Corresponding Affymetrix probe sets: 10526169 (MoGene1.0st)   1425846_a_at (Mouse Genome 430 2.0 Array)   1442695_at (Mouse Genome 430 2.0 Array)   1445202_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000083193
Ensembl peptide - ENSMUSP00000106919
Ensembl peptide - ENSMUSP00000143823
Ensembl peptide - ENSMUSP00000144225
Ensembl peptide - ENSMUSP00000106918
NCBI entrez gene - 140904     See in Manteia.
MGI - MGI:2155987
RefSeq - XM_006504374
RefSeq - NM_181045
RefSeq - XM_006504366
RefSeq - XM_006504367
RefSeq - XM_006504368
RefSeq - XM_006504369
RefSeq - XM_006504372
RefSeq - XM_006504373
RefSeq - NM_021371
RefSeq Peptide - NP_851388
RefSeq Peptide - NP_067346
swissprot - Q9JJG7
swissprot - F8WHE1
swissprot - Q542R1
swissprot - A0A0J9YTS0
swissprot - A0A0J9YUK5
Ensembl - ENSMUSG00000060371
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 caln1ENSDARG00000088898Danio rerio
 CALN1ENSGALG00000001122Gallus gallus
 CALN1ENSG00000183166Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cabp7 / Q91ZM8 / Calcium-binding protein 7 / Q86V35*ENSMUSG0000000907552


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032588 trans-Golgi network membrane ISO
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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