ENSMUSG00000062040


Mus musculus

Features
Gene ID: ENSMUSG00000062040
  
Biological name :Zfp27
  
Synonyms : P10077 / Zfp27 / zinc finger protein 27
  
Possible biological names infered from orthology : Q52M93 / Q6P3V2 / zinc finger protein 585A / zinc finger protein 585B / ZNF585A / ZNF585B
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: B1
Gene start: 29893333
Gene end: 29906572
  
Corresponding Affymetrix probe sets: 10561787 (MoGene1.0st)   1440835_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125232
Ensembl peptide - ENSMUSP00000123953
Ensembl peptide - ENSMUSP00000124684
Ensembl peptide - ENSMUSP00000054012
Ensembl peptide - ENSMUSP00000127677
NCBI entrez gene - 22689     See in Manteia.
MGI - MGI:99174
RefSeq - XM_017322132
RefSeq - NM_001037707
RefSeq - NM_001285797
RefSeq - NM_001285798
RefSeq - NM_011754
RefSeq - XM_011250481
RefSeq - XM_011250482
RefSeq Peptide - NP_035884
RefSeq Peptide - NP_001032796
RefSeq Peptide - NP_001272726
RefSeq Peptide - NP_001272727
swissprot - P10077
Ensembl - ENSMUSG00000062040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkeyp-82h4.3ENSDARG00000102062Danio rerio
 znf1021ENSDARG00000114646Danio rerio
 znf1026ENSDARG00000114894Danio rerio
 znf976ENSDARG00000113626Danio rerio
 znf985ENSDARG00000109604Danio rerio
 znf985ENSDARG00000114783Danio rerio
 Q52M93ENSG00000245680Homo sapiens
 Q6P3V2ENSG00000196967Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp729a / zinc finger protein 729a / ZNF99* / A6NN14* / A8MXY4* / ZNF729* / zinc finger protein 99* / zinc finger protein 729*ENSMUSG0000002151044
Gm4924ENSMUSG0000007342744
Gm13212ENSMUSG0000007850244
Zfp808 / zinc finger protein 80ENSMUSG0000007486742
Zfp62 / Q8C827 / zinc finger protein 62 / Q8NB50* / ZFP62 zinc finger protein*ENSMUSG0000004631141
Gm29106ENSMUSG0000010203041
BC024063 / cDNA sequence BC024063ENSMUSG0000011216040
Zfp616 / zinc finger protein 616ENSMUSG0000006947639
Zfp873 / zinc finger protein 873ENSMUSG0000006137138
5430403G16Rik / RIKEN cDNA 5430403G16 geneENSMUSG0000007276338
Gm14124ENSMUSG0000007900838
Zfp442 / zinc finger protein 442ENSMUSG0000006813037
Zfp160 / zinc finger protein 160 / Q9HCG1* / Q96SE7* / ZNF160* / ZNF347* / zinc finger protein 347*ENSMUSG0000006794236
Zfp788 / zinc finger protein 788 / Q9H0M5* / ZNF700* / zinc finger protein 700*ENSMUSG0000007416535


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr