ENSMUSG00000062110


Mus musculus

Features
Gene ID: ENSMUSG00000062110
  
Biological name :Scfd2
  
Synonyms : Q8BTY8 / Scfd2 / Sec1 family domain-containing protein 2
  
Possible biological names infered from orthology : Q8WU76 / sec1 family domain containing 2
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: C3.3
Gene start: 74204816
Gene end: 74531759
  
Corresponding Affymetrix probe sets: 10530652 (MoGene1.0st)   1433608_at (Mouse Genome 430 2.0 Array)   1447367_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000075245
Ensembl peptide - ENSMUSP00000121098
Ensembl peptide - ENSMUSP00000144640
Ensembl peptide - ENSMUSP00000072636
Ensembl peptide - ENSMUSP00000109170
NCBI entrez gene - 212986     See in Manteia.
MGI - MGI:2443446
RefSeq - NM_001114660
RefSeq - NM_001286437
RefSeq - NM_178672
RefSeq Peptide - NP_001108132
RefSeq Peptide - NP_001273366
RefSeq Peptide - NP_848787
swissprot - Q8BTY8
swissprot - A0A0J9YVF7
swissprot - Q3TR67
Ensembl - ENSMUSG00000062110
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX511028.1ENSDARG00000115492Danio rerio
 scfd2ENSDARG00000040005Danio rerio
 si:ch73-249k16.4ENSDARG00000093336Danio rerio
 ENSGALG00000013946Gallus gallus
 ENSGALG00000039168Gallus gallus
 SCFD2ENSG00000184178Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein
 IPR036045  Sec1-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr