ENSMUSG00000062296


Mus musculus

Features
Gene ID: ENSMUSG00000062296
  
Biological name :Trank1
  
Synonyms : Q8BV79 / TPR and ankyrin repeat-containing protein 1 / Trank1
  
Possible biological names infered from orthology : O15050 / tetratricopeptide repeat and ankyrin repeat containing 1
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: F3
Gene start: 111311739
Gene end: 111395775
  
Corresponding Affymetrix probe sets: 10589761 (MoGene1.0st)   10589773 (MoGene1.0st)   1429276_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000077697
Ensembl peptide - ENSMUSP00000143534
NCBI entrez gene - 320429     See in Manteia.
MGI - MGI:1341834
RefSeq - XM_017313432
RefSeq - NM_001164659
RefSeq - XM_006512163
RefSeq - XM_006512164
RefSeq - XM_006512165
RefSeq - XM_006512160
RefSeq - XM_006512161
RefSeq - XM_006512162
RefSeq Peptide - NP_001158131
swissprot - Q8BV79
swissprot - A0A0G2JGE4
Ensembl - ENSMUSG00000062296
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRANK1ENSGALG00000037629Gallus gallus
 O15050ENSG00000168016Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr