ENSMUSG00000062651


Mus musculus

Features
Gene ID: ENSMUSG00000062651
  
Biological name :H2afb1
  
Synonyms : H2afb1 / Histone H2A-Bbd type 1 / Q9CQ70
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: A3
Gene start: 17996417
Gene end: 17996958
  
Corresponding Affymetrix probe sets: 10480317 (MoGene1.0st)   1418303_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000100618
NCBI entrez gene - 68231     See in Manteia.
MGI - MGI:1915481
RefSeq - NM_026627
RefSeq Peptide - NP_080903
swissprot - Q9CQ70
Ensembl - ENSMUSG00000062651
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
H2al2cENSMUSG0000009488186
H2al2bENSMUSG0000009557386
H2al1jENSMUSG0000006903877
H2al1oENSMUSG0000006106577
H2al1kENSMUSG0000010044876
H2al1nENSMUSG0000007834676
H2al1g / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009566275
H2al1d / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009490475
H2al1eENSMUSG0000009541375
H2al1f / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009565575
H2al1h / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009944375
H2al1i / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009544575
H2al1c / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000009609775
H2al1a / Q5M8Q2 / Histone H2A-like 1 ENSMUSG0000010062675
H2al1bENSMUSG0000010181975
H2al1mENSMUSG0000010020074
H2al3ENSMUSG0000004899438


Protein motifs (from Interpro)
Interpro ID Name
 IPR002119  Histone H2A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly ISS
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0035093 spermatogenesis, exchange of chromosomal proteins IDA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0000788 nuclear nucleosome ISS
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0042393 histone binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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