ENSMUSG00000063316


Mus musculus

Features
Gene ID: ENSMUSG00000063316
  
Biological name :Rpl27
  
Synonyms : 60S ribosomal protein L27 / P61358 / Rpl27
  
Possible biological names infered from orthology : P61353 / ribosomal protein L27
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: D
Gene start: 101442298
Gene end: 101445529
  
Corresponding Affymetrix probe sets: 10360128 (MoGene1.0st)   10381402 (MoGene1.0st)   10389875 (MoGene1.0st)   10453690 (MoGene1.0st)   1416099_at (Mouse Genome 430 2.0 Array)   1448217_a_at (Mouse Genome 430 2.0 Array)   1453096_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090305
Ensembl peptide - ENSMUSP00000102870
Ensembl peptide - ENSMUSP00000120418
NCBI entrez gene - 108167922     See in Manteia.
NCBI entrez gene - 19942     See in Manteia.
MGI - MGI:98036
RefSeq - NM_011289
RefSeq Peptide - NP_035419
swissprot - A2A4Q0
swissprot - P61358
swissprot - Q5BLJ9
Ensembl - ENSMUSG00000063316
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX901883.4ENSDARG00000113664Danio rerio
 RPL27ENSG00000131469Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P61358 / Rpl27-ps3 / ribosomal protein L27, pseudogene 3ENSMUSG00000073640100


Protein motifs (from Interpro)
Interpro ID Name
 IPR001141  Ribosomal protein L27e
 IPR005824  KOW
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2
 IPR018262  Ribosomal protein L27e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit ISS
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 cellular_componentGO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane ISS
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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