ENSMUSG00000068284


Mus musculus

Features
Gene ID: ENSMUSG00000068284
  
Biological name :Usf3
  
Synonyms : upstream transcription factor family member 3 / Usf3
  
Possible biological names infered from orthology : Q68DE3
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B4
Gene start: 44173246
Gene end: 44227465
  
Corresponding Affymetrix probe sets: 10435832 (MoGene1.0st)   1428681_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000085694
Ensembl peptide - ENSMUSP00000112620
Ensembl peptide - ENSMUSP00000128627
NCBI entrez gene - 207806     See in Manteia.
MGI - MGI:2685454
RefSeq - XM_017316902
RefSeq - XM_006521899
RefSeq - XM_006521900
RefSeq - XM_006521901
RefSeq - NM_001029889
RefSeq - XM_006521898
RefSeq Peptide - NP_001025060
swissprot - F8WJI0
swissprot - B2RUQ2
Ensembl - ENSMUSG00000068284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usf3ENSDARG00000077431Danio rerio
 USF3ENSGALG00000031560Gallus gallus
 USF3ENSG00000176542Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006491 N-glycan processing IBA
 biological_processGO:0010719 negative regulation of epithelial to mesenchymal transition ISO
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 molecular_functionGO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002080 prenatal lethality "death anytime between fertilization and E18.5" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tmem79tm1.1(KOMP)Wtsi/Tmem79tm1.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmem79tm1.1(KOMP)Wtsi/J

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Tmem79tm1.1(KOMP)Wtsi/Tmem79tm1.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmem79tm1.1(KOMP)Wtsi/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr