ENSMUSG00000068921


Mus musculus

Features
Gene ID: ENSMUSG00000068921
  
Biological name :Dap3
  
Synonyms : 28S ribosomal protein S29, mitochondrial / Dap3 / Q9ER88
  
Possible biological names infered from orthology : death associated protein 3 / P51398
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 88920803
Gene end: 88951181
  
Corresponding Affymetrix probe sets: 10499454 (MoGene1.0st)   1450848_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000134433
Ensembl peptide - ENSMUSP00000134165
Ensembl peptide - ENSMUSP00000134422
Ensembl peptide - ENSMUSP00000088456
Ensembl peptide - ENSMUSP00000103115
Ensembl peptide - ENSMUSP00000133314
Ensembl peptide - ENSMUSP00000133349
Ensembl peptide - ENSMUSP00000133395
Ensembl peptide - ENSMUSP00000133486
Ensembl peptide - ENSMUSP00000134145
NCBI entrez gene - 65111     See in Manteia.
MGI - MGI:1929538
RefSeq - XM_006501869
RefSeq - NM_001164533
RefSeq - NM_022994
RefSeq - XM_006501862
RefSeq - XM_006501863
RefSeq - XM_006501864
RefSeq - XM_006501865
RefSeq - XM_006501866
RefSeq - XM_006501867
RefSeq - XM_006501868
RefSeq Peptide - NP_075370
RefSeq Peptide - NP_001158005
swissprot - G3UWR5
swissprot - G3UWZ6
swissprot - G3UYM6
swissprot - G3UYP3
swissprot - G3UZC0
swissprot - G3X9M0
swissprot - G3UWJ4
swissprot - A0A0R4J1B9
swissprot - Q9ER88
swissprot - G3UWM7
Ensembl - ENSMUSG00000068921
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dap3ENSDARG00000078500Danio rerio
 DAP3ENSGALG00000019796Gallus gallus
 DAP3ENSG00000132676Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008092  Ribosomal protein S29, mitochondrial
 IPR019368  Ribosomal protein S23/S29, mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0008637 apoptotic mitochondrial changes IDA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005759 mitochondrial matrix IDA
 cellular_componentGO:0005761 mitochondrial ribosome IEA
 cellular_componentGO:0005763 mitochondrial small ribosomal subunit IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001577 anemia "less than normal levels of red blood cells, hemoglobin or volume of packed red blood cells " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:53370]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0001698 reduced embryo size "smaller proportions of embryo compared to littermates" [J:61790]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0001712 abnormal placental development "malformed or incomplete differentiation of the organ of metabolic exchange between the fetus and mother" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61790]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0004180 failure of initiation of embryo turning "failure to begin the axial rotation of the germ layers of the embryo during the primitive streak/early somite stage (E8.5-E9.5)" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0004258 abnormal placenta size "anomaly in the size or shape of the organ of metabolic interchange between fetus and mother" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0006035 abnormal mitochondrial morphology "anomalous structure of the mitochondria" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

 MP:0013502 decreased fibroblast apoptosis "reduction in the timing or the number of fibroblast cells undergoing programmed cell death" [MGI:csmith]
Show

Allelic Composition: Ppargc1btm1Lowl/Ppargc1btm1Lowl
Genetic Background: involves: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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