ENSMUSG00000071679


Mus musculus

Features
Gene ID: ENSMUSG00000071679
  
Biological name :Rtl4
  
Synonyms : Q3URY0 / Retrotransposon Gag-like protein 4 / Rtl4
  
Possible biological names infered from orthology : Q6ZR62 / retrotransposon Gag like 4
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: F2
Gene start: 144688907
Gene end: 145122411
  
Corresponding Affymetrix probe sets: 10602255 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000108462
Ensembl peptide - ENSMUSP00000108463
NCBI entrez gene - 619287     See in Manteia.
MGI - MGI:3588192
RefSeq - XM_011247867
RefSeq - NM_001033795
RefSeq - XM_011247865
RefSeq - XM_011247866
RefSeq - XM_006528952
RefSeq - XM_011247862
RefSeq - XM_011247864
RefSeq Peptide - NP_001028967
swissprot - Q3URY0
Ensembl - ENSMUSG00000071679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTL4ENSG00000187823Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtl3 / Q6P1Y1 / Retrotransposon Gag-like protein 3 / Q8N8U3* / retrotransposon Gag like 3*ENSMUSG0000004768625


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR032567  LDOC1-related
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042415 norepinephrine metabolic process IMP
 biological_processGO:0050890 cognition IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr