ENSMUSG00000073412


Mus musculus

Features
Gene ID: ENSMUSG00000073412
  
Biological name :Lst1
  
Synonyms : Lst1
  
Possible biological names infered from orthology : leukocyte specific transcript 1 / O00453
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 35185095
Gene end: 35188439
  
Corresponding Affymetrix probe sets: 10450496 (MoGene1.0st)   1425548_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000094949
NCBI entrez gene - 16988     See in Manteia.
MGI - MGI:1096324
RefSeq - NM_010734
RefSeq Peptide - NP_034864
swissprot - B8JJ61
Ensembl - ENSMUSG00000073412
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LST1ENSG00000204482Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007775  Leukocyte-specific transcript 1, LST-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0006955 immune response IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000062 increased bone density "increased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61295]
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Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0000266 abnormal cardiac morphology "anomalies in the hollow, muscular organ that maintains the circulation of the blood" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0000274 enlarged heart "increase over normal size of the heart" [J:29971]
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Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0001146 abnormal testis morphology "anomalous structure of the male reproductive glands" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0001147 small testis "reduced size of the male reproductive glands" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:58959]
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Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0002060 abnormal skin morphology "malformation or atypical structure of the membranous protective covering of the body" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:56777]
Show

Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

 MP:0002418 increased susceptibility to viral infection "greater likelihood that an organism will develop ill effects from a viral infection or from components of or toxins produced by a virus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Prmt8tm1d(EUCOMM)Wtsi/Prmt8+
Genetic Background: involves: C57BL/6N

 MP:0009791 increased susceptibility to viral infection induced morbidity/mortality "increased likelihood that an organism will display the expected moribund state caused by a viral invasion or from components of or toxins produced by a virus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Prmt8tm1d(EUCOMM)Wtsi/Prmt8+
Genetic Background: involves: C57BL/6N

 MP:0010123 increased bone mineral content "elevation in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Lrrk1tm1b(KOMP)Wtsi/Lrrk1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Lrrk1tm1b(KOMP)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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