ENSMUSG00000074440


Mus musculus

Features
Gene ID: ENSMUSG00000074440
  
Biological name :Defa3
  
Synonyms : Alpha-defensin 3 / Defa3 / P28310
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A2
Gene start: 21287409
Gene end: 21288377
  
Corresponding Affymetrix probe sets: 10570656 (MoGene1.0st)   10570668 (MoGene1.0st)   10570676 (MoGene1.0st)   10570683 (MoGene1.0st)   10570690 (MoGene1.0st)   10570729 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000096492
NCBI entrez gene - 13237     See in Manteia.
MGI - MGI:94883
RefSeq - NM_007850
RefSeq Peptide - NP_031876
swissprot - P28310
Ensembl - ENSMUSG00000074440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Defa17 / P28310 / Alpha-defensin 3 ENSMUSG00000060208100
Q5G866 / Defa-rs7 / Alpha-defensin 23 ENSMUSG0000007444295
Defa23 / Q5G866 / Alpha-defensin 23 ENSMUSG0000007444695
Defa30ENSMUSG0000007444494
Defa24 / Q5G865 / Alpha-defensin 24 ENSMUSG0000006421391
Defa34ENSMUSG0000006320673
Defa5ENSMUSG0000007443971
Defa37ENSMUSG0000006595671
Defa36ENSMUSG0000009466271
Defa35ENSMUSG0000006184571
Gm15293ENSMUSG0000007911669


Protein motifs (from Interpro)
Interpro ID Name
 IPR002366  Defensin propeptide
 IPR006080  Beta/alpha defensin
 IPR006081  Alpha-defensin
 IPR016327  Alpha-defensin propeptide


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006952 defense response IEA
 biological_processGO:0042493 response to drug IDA
 biological_processGO:0042742 defense response to bacterium IDA
 biological_processGO:0050829 defense response to Gram-negative bacterium IGI
 biological_processGO:0050830 defense response to Gram-positive bacterium IGI
 biological_processGO:0071222 cellular response to lipopolysaccharide IGI
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr