ENSMUSG00000078606


Mus musculus

Features
Gene ID: ENSMUSG00000078606
  
Biological name :Gm4070
  
Synonyms : Gm4070 / Interferon-induced very large GTPase 1 / Q80SU7
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: E3
Gene start: 105895139
Gene end: 105953967
  
Corresponding Affymetrix probe sets: 10566571 (MoGene1.0st)   10566574 (MoGene1.0st)   10566578 (MoGene1.0st)   1429184_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102377
Ensembl peptide - ENSMUSP00000135667
Ensembl peptide - ENSMUSP00000135898
NCBI entrez gene - 100042856     See in Manteia.
MGI - MGI:3782245
RefSeq - XM_017321896
RefSeq - NM_001243039
RefSeq - NM_001243040
RefSeq Peptide - NP_001229968
RefSeq Peptide - NP_001229969
swissprot - Q80SU7
swissprot - H3BL64
Ensembl - ENSMUSG00000078606
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-175d9.2ENSDARG00000093476Danio rerio
 ENSGALG00000016556Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gvin1ENSMUSG00000045868100
Urgcp / Q5NCI0 / upregulator of cell proliferation / Q8TCY9*ENSMUSG0000004968010
Card6 / caspase recruitment domain family, member 6 / Q9BX69*ENSMUSG000000418498


Protein motifs (from Interpro)
Interpro ID Name
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029028  Alpha/beta knot methyltransferases
 IPR030383  Very large inducible GTPASE (VLIG)-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr