ENSMUSG00000089832


Mus musculus

Features
Gene ID: ENSMUSG00000089832
  
Biological name :Shkbp1
  
Synonyms : Q6P7W2 / SH3KBP1-binding protein 1 / Shkbp1
  
Possible biological names infered from orthology : Q8TBC3
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A3
Gene start: 27342133
Gene end: 27356019
  
Corresponding Affymetrix probe sets: 10561247 (MoGene1.0st)   1424174_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000003857
NCBI entrez gene - 192192     See in Manteia.
MGI - MGI:2385803
RefSeq - XM_017322044
RefSeq - NM_138676
RefSeq - XM_006539667
RefSeq - XM_006539668
RefSeq Peptide - NP_619617
swissprot - Q6P7W2
Ensembl - ENSMUSG00000089832
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SHKBP1ENSDARG00000105050Danio rerio
 Q8TBC3ENSG00000160410Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Kctd3 / Q8BFX3 / BTB/POZ domain-containing protein KCTD3 / Q9Y597* / potassium channel tetramerization domain containing 3*ENSMUSG0000002660860


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR001680  WD40 repeat
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045742 positive regulation of epidermal growth factor receptor signaling pathway IMP
 biological_processGO:0051260 protein homooligomerization IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005764 lysosome IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr