ENSMUSG00000090693


Mus musculus

Features
Gene ID: ENSMUSG00000090693
  
Biological name :Trim43a
  
Synonyms : Mus musculus tripartite motif-containing 43A (Trim43a), transcript variant 1, mRNA. / Q3TL54 / Trim43a
  
Possible biological names infered from orthology : A6NCK2 / Q96BQ3 / TRIM43 / TRIM43B / tripartite motif containing 43 / tripartite motif containing 43B
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: E3.1
Gene start: 88580891
Gene end: 88588819
  
Corresponding Affymetrix probe sets: 10587659 (MoGene1.0st)   1437004_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000127527
Ensembl peptide - ENSMUSP00000149926
Ensembl peptide - ENSMUSP00000150842
NCBI entrez gene - 547109     See in Manteia.
MGI - MGI:3645218
RefSeq - XM_017313486
RefSeq - NM_001034906
RefSeq - NM_001357687
RefSeq Peptide - NP_001030078
RefSeq Peptide - NP_001344616
swissprot - Q3TL54
swissprot - A0A1L1SUN2
Ensembl - ENSMUSG00000090693
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A6NCK2ENSG00000144010Homo sapiens
 Q96BQ3ENSG00000144015Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P86448 / Trim43b / Tripartite motif-containing protein 43B / TRIM43* / Q96BQ3* / A6NCK2* / tripartite motif containing 43* / tripartite motif containing 43B*ENSMUSG0000007916296
P86449 / Trim43c / Tripartite motif-containing protein 43C / A6NCK2* / Q96BQ3* / TRIM43* / TRIM43B* / tripartite motif containing 43* / tripartite motif containing 43B*ENSMUSG0000006739993
Q8BVP1 / Triml1 / tripartite motif family-like 1 / Q8N9V2*ENSMUSG0000003165124
Triml2 / tripartite motif family-like 2 / Q8N7C3*ENSMUSG0000009149019


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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