ENSMUSG00000090935


Mus musculus

Features
Gene ID: ENSMUSG00000090935
  
Biological name :Synj2bp
  
Synonyms : Q9D6K5 / synaptojanin 2 binding protein / Synj2bp
  
Possible biological names infered from orthology : P57105
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D1
Gene start: 81497941
Gene end: 81532911
  
Corresponding Affymetrix probe sets: 10401322 (MoGene1.0st)   10441342 (MoGene1.0st)   1417834_at (Mouse Genome 430 2.0 Array)   1428015_at (Mouse Genome 430 2.0 Array)   1431507_a_at (Mouse Genome 430 2.0 Array)   1448853_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130691
Ensembl peptide - ENSMUSP00000109839
Ensembl peptide - ENSMUSP00000129053
Ensembl peptide - ENSMUSP00000129224
NCBI entrez gene - 24071     See in Manteia.
MGI - MGI:1344347
RefSeq - NM_001309814
RefSeq - NM_025292
RefSeq Peptide - NP_001296743
RefSeq Peptide - NP_079568
swissprot - E9PVQ9
swissprot - Q9D6K5
Ensembl - ENSMUSG00000090935
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 synj2bpENSDARG00000028321Danio rerio
 SYNJ2BPENSGALG00000035537Gallus gallus
 P57105ENSG00000213463Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9D6K5 / Gm20498 / Synaptojanin-2-binding protein / SYNJ2BP-COX16* / SYNJ2BP-COX16 readthrough*ENSMUSG0000002113974


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001937 negative regulation of endothelial cell proliferation ISO
 biological_processGO:0006605 protein targeting IDA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0007028 cytoplasm organization ISO
 biological_processGO:0007266 Rho protein signal transduction IDA
 biological_processGO:0008593 regulation of Notch signaling pathway ISO
 biological_processGO:0010596 negative regulation of endothelial cell migration ISO
 biological_processGO:0016525 negative regulation of angiogenesis ISO
 biological_processGO:0030100 regulation of endocytosis IDA
 biological_processGO:0048312 intracellular distribution of mitochondria IEA
 biological_processGO:0070373 negative regulation of ERK1 and ERK2 cascade ISS
 biological_processGO:1903671 negative regulation of sprouting angiogenesis ISS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005741 mitochondrial outer membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr