ENSMUSG00000095932


Mus musculus

Features
Gene ID: ENSMUSG00000095932
  
Biological name :Vmn1r49
  
Synonyms : Q9WUF1 / Vmn1r49 / vomeronasal 1, receptor 49
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: D1
Gene start: 90071893
Gene end: 90078506
  
Corresponding Affymetrix probe sets: 10546240 (MoGene1.0st)   1421778_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000071762
Ensembl peptide - ENSMUSP00000145107
Ensembl peptide - ENSMUSP00000154456
NCBI entrez gene - 24112     See in Manteia.
MGI - MGI:1344384
RefSeq - NM_011911
RefSeq - XM_006506065
RefSeq Peptide - NP_036041
swissprot - Q9WUF1
Ensembl - ENSMUSG00000095932
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9EQ47 / Vmn1r44 / vomeronasal 1 receptor 44ENSMUSG0000006823483
Q9EQ46 / Vmn1r40 / vomeronasal 1 receptor 40ENSMUSG0000009605182
Q9EP51 / Vmn1r50 / vomeronasal 1 receptor 50ENSMUSG0000009455381
Vmn1r53 / vomeronasal 1 receptor 53ENSMUSG0000005769780
Vmn1r41 / vomeronasal 1 receptor 41ENSMUSG0000009458680
Q9EQ45 / Vmn1r46 / vomeronasal 1 receptor 46ENSMUSG0000006165376
Q8VIC7 / Vmn1r45 / vomeronasal 1 receptor 45ENSMUSG0000004424852
Q8VBS7 / Vmn1r42 / vomeronasal 1 receptor 42ENSMUSG0000006823251
Q9EQ52 / Vmn1r48 / vomeronasal 1 receptor 48ENSMUSG0000005759251
Vmn1r51 / vomeronasal 1 receptor 51ENSMUSG0000006281850
Q8VIC9 / Vmn1r43 / vomeronasal 1 receptor 43ENSMUSG0000006823150
Vmn1r47 / vomeronasal 1 receptor 47ENSMUSG0000006072450
Q9EPB8 / Vmn1r54 / vomeronasal 1 receptor 54ENSMUSG0000004720347
Vmn1r1 / vomeronasal 1 receptor 1ENSMUSG0000009101340
Q9EP79 / Vmn1r52 / vomeronasal 1 receptor 52ENSMUSG0000006081640
V1ra8 / Q9EQ48 / vomeronasal 1 receptor, A8ENSMUSG0000006254636


Protein motifs (from Interpro)
Interpro ID Name
 IPR004072  Vomeronasal receptor, type 1
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007606 sensory perception of chemical stimulus TAS
 biological_processGO:0019236 response to pheromone IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0016503 pheromone receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000819 abnormal olfactory bulb morphology "malformation or absence of the forebrain region that coordinates neuronal signaling involved in the perception of smell; it receives input from the sensory neurons and outputs to the olfactory cortex" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, Principles of Neural Science:ISBN 0-8385-8034-3, J:16461]
Show

Allelic Composition: Nrp2tm1.2Mom/Nrp2tm1.2Mom,Vmn1r49tm1Mom/Vmn1r49tm1Mom
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0009945 abnormal accessory olfactory bulb morphology "any structural anomaly of the forebrain region that coordinates sensory signaling arising from the vomeronasal organ; it is located on the dorsal-posterior portion of the main olfactory bulb, and the axons that leave the accessory olfactory bulb project to targets in the amygdala and hypothalamus" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Stx2tm1Dcru/Stx2+
Genetic Background: involves: 129X1/SvJ * C57BL/6J

Allelic Composition: Vmn1r49tm4(Olfr151)Mom/Vmn1r49tm4(Olfr151)Mom
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Sema3ftm1Mom/Sema3ftm1Mom,Vmn1r49tm1Mom/Vmn1r49tm1Mom
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

Allelic Composition: Sema3ftm1Mom/Sema3f+,Vmn1r49tm1Mom/Vmn1r49tm1Mom
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0012014 abnormal olfactory neuron innervation pattern "any changes in the placement, morphology or number of axons from olfactory neurons to an effector tissue or to olfactory glomeruli or olfactory bulb" [MGI:csmith]
Show

Allelic Composition: Stx2tm1Dcru/Stx2+
Genetic Background: involves: 129X1/SvJ * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr