ENSDARG00000002021


Danio rerio

Features
Gene ID: ENSDARG00000002021
  
Biological name :pygb
  
Synonyms : phosphorylase, glycogen; brain / pygb
  
Possible biological names infered from orthology : glycogen phosphorylase B / Glycogen phosphorylase, brain form / P11216 / Q8CI94
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 21126495
Gene end: 21152173
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000025885
swissprot - F1R5X0
ZFIN ID - ZDB-GENE-040928-2
Ensembl - ENSDARG00000002021
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PYGBENSGALG00000008508Gallus gallus
 PYGBENSG00000100994Homo sapiens
 PygbENSMUSG00000033059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pygmb / phosphorylase, glycogen, muscle b / PYGM* / P11217* / Q9WUB3* / Glycogen phosphorylase, muscle form * / glycogen phosphorylase, muscle associated*ENSDARG0000001331781
pygma / phosphorylase, glycogen, muscle A / PYGM* / P11217* / Q9WUB3* / Glycogen phosphorylase, muscle form * / glycogen phosphorylase, muscle associated*ENSDARG0000005551881
pygl / phosphorylase, glycogen, liver / P06737* / Q9ET01* / glycogen phosphorylase L* / Glycogen phosphorylase, liver form *ENSDARG0000000219780


Protein motifs (from Interpro)
Interpro ID Name
 IPR000811  Glycosyl transferase, family 35
 IPR011833  Glycogen/starch/alpha-glucan phosphorylase
 IPR035090  Phosphorylase pyridoxal-phosphate attachment site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0005980 glycogen catabolic process IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004645 phosphorylase activity IEA
 molecular_functionGO:0008184 glycogen phosphorylase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IBA
 molecular_functionGO:0102250 linear malto-oligosaccharide phosphorylase activity IEA
 molecular_functionGO:0102499 SHG alpha-glucan phosphorylase activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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