ENSDARG00000002949


Danio rerio

Features
Gene ID: ENSDARG00000002949
  
Biological name :ppp6c
  
Synonyms : ppp6c / protein phosphatase 6, catalytic subunit
  
Possible biological names infered from orthology : O00743 / Q9CQR6 / Serine/threonine-protein phosphatase 6 catalytic subunit
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 31983098
Gene end: 31995401
  
Corresponding Affymetrix probe sets: Dr.16126.1.S1_at (Zebrafish Array)   NM_201005_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025917
NCBI entrez gene - 393980     See in Manteia.
RefSeq - NM_201005
RefSeq Peptide - NP_957299
swissprot - Q7ZUS7
ZFIN ID - ZDB-GENE-040426-949
Ensembl - ENSDARG00000002949
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPP6CENSGALG00000001013Gallus gallus
 PPP6CENSG00000119414Homo sapiens
 Ppp6cENSMUSG00000026753Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR006186  Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0006470 protein dephosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000009023 ankrd28b / ankyrin repeat domain 28b / O15084* / Q505D1* / ANKRD28* / ankyrin repeat domain 28* / Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A *  / complex
 ENSDARG00000071906 sec24b / SEC24 homolog B, COPII coat complex component / O95487* / Sec24 related gene family, member B (S. cerevisiae)*  / reaction
 ENSDARG00000103516 sec24c / SEC24 homolog C, COPII coat complex component / P53992* / Sec24 related gene family, member C (S. cerevisiae)*  / reaction
 ENSDARG00000104375 sec24a / SEC24 homolog A, COPII coat complex component / O95486*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr