ENSDARG00000003109


Danio rerio

Features
Gene ID: ENSDARG00000003109
  
Biological name :rcan1a
  
Synonyms : rcan1a / regulator of calcineurin 1a
  
Possible biological names infered from orthology : P53805 / Q9JHG6 / RCAN1 / regulator of calcineurin 1
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 35843732
Gene end: 35865528
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017482
Ensembl peptide - ENSDARP00000114420
swissprot - B0R065
swissprot - B0R069
ZFIN ID - ZDB-GENE-040801-135
Ensembl - ENSDARG00000003109
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCAN1ENSGALG00000016014Gallus gallus
 RCAN1ENSG00000159200Homo sapiens
 Rcan1ENSMUSG00000022951Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rcan2 / regulator of calcineurin 2 / Q14206* / Q9JHG2*ENSDARG0000002186951
rcan3 / regulator of calcineurin 3 / Q9UKA8* / Q9JKK0* / Calcipressin-3 * / RCAN family member 3*ENSDARG0000003262350


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006931  Calcipressin
 IPR031271  Calcipressin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0019722 calcium-mediated signaling IEA
 biological_processGO:0033173 calcineurin-NFAT signaling cascade IEA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0070884 regulation of calcineurin-NFAT signaling cascade IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001285 intersegmental vessel intersegmental vessel decreased branchiness , abnormal
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 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel angiogenic sprout fusion arrested , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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