ENSDARG00000003208


Danio rerio

Features
Gene ID: ENSDARG00000003208
  
Biological name :pomk
  
Synonyms : pomk / protein-O-mannose kinase / Q5U3W1
  
Possible biological names infered from orthology : Q3TUA9 / Q9H5K3
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 9548849
Gene end: 9558423
  
Corresponding Affymetrix probe sets: Dr.14038.1.A1_at (Zebrafish Array)   Dr.3907.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000109435
NCBI entrez gene - 492773     See in Manteia.
swissprot - Q5U3W1
ZFIN ID - ZDB-GENE-041114-119
Ensembl - ENSDARG00000003208
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POMKENSGALG00000026210Gallus gallus
 POMKENSG00000185900Homo sapiens
 PomkENSMUSG00000037251Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006493 protein O-linked glycosylation ISS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0036268 swimming IMP
 biological_processGO:0046835 carbohydrate phosphorylation ISS
 biological_processGO:0061061 muscle structure development IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016773 phosphotransferase activity, alcohol group as acceptor ISS
 molecular_functionGO:0030247 polysaccharide binding IDA
 molecular_functionGO:0043531 ADP binding IDA


Pathways (from Reactome)
Pathway description
O-linked glycosylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite U-shaped , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased mobility , abnormal
whole organism dead , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
post-vent region increased thickness , abnormal
Show

 ZFA:0005145 muscle muscle dystrophic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000016153 dag1 / dystroglycan 1 / Q14118* / Q62165* / Dystroglycan Alpha-dystroglycan Beta-dystroglycan*  / reaction






 

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