ENSDARG00000004472


Danio rerio
activityatat1microtubulecytoskeletoncelltransferasegcn-relatedgnatdomainatat-typeacyl-coan-acyltransferaseregulationorganizationalpha-tubulinacetylationcytoplasmspindleclathrin-coatedpitfocaladhesionmembranejunctionaxonprojectionlysineactingacetyl

Features
Gene ID: ENSDARG00000004472
  
Biological name :atat1
  
Synonyms : alpha tubulin acetyltransferase 1 / atat1 / Q6PH17
  
Possible biological names infered from orthology : Mus musculus alpha tubulin acetyltransferase 1 (Atat1), transcript variant 5, mRNA. / Q5SQI0 / Q8K341
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 27479563
Gene end: 27515651
  
Corresponding Affymetrix probe sets: Dr.6427.1.A1_at (Zebrafish Array)   NM_213258_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049367
Ensembl peptide - ENSDARP00000094698
Ensembl peptide - ENSDARP00000154756
NCBI entrez gene - 406389     See in Manteia.
RefSeq - NM_213258
RefSeq - NM_001328264
RefSeq Peptide - NP_001315193
RefSeq Peptide - NP_998423
swissprot - Q6PH17
ZFIN ID - ZDB-GENE-040426-2120
Ensembl - ENSDARG00000004472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATAT1ENSG00000137343Homo sapiens
 Atat1ENSMUSG00000024426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007965  Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type
 IPR016181  Acyl-CoA N-acyltransferase


Gene Ontology (GO)
cellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmicrotubule-based processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component orgacellular component organizationmicrotubule-based procemicrotubule-based processnitrogen compound metabnitrogen compound metabolic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic process
transferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitycofactor bindingtransferase activitytransferase activitycofactor bindingcofactor binding
cellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellorganellesupramolecular complexmembranecell junctioncellcellorganelleorganellesupramolecular complexsupramolecular complexmembranemembranecell junctioncell junction
TypeGO IDTermEv.Code
 biological_processGO:0070507 regulation of microtubule cytoskeleton organization IBA
 biological_processGO:0071929 alpha-tubulin acetylation IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0004468 lysine N-acetyltransferase activity, acting on acetyl phosphate as donor ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0019799 tubulin N-acetyltransferase activity ISS
 molecular_functionGO:0050662 coenzyme binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0001094 whole organism whole organism curved , abnormal
whole organism decreased length , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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